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ConSurf Analysis for: 1ECV chain
- The calculation is based on PDB 1C83 chain A which is 100% sequence identical to: 1C84_A, 1C85_A, 1C87_A, 1C88_A, 1ECV_A.
- 169 homologs were collected from the SWISS-PROT database using CS-BLAST - 106 of them are unique and were used for the calculation.
- Multiple Sequence Alignment: FASTA format | CLUSTALW format
- Alignment details (Pairwise distance and residue variety per position)
Main results
Advanced ConSurf Options
PatchFinder - Identification of functional regions in proteins
ConSurf server - Rerun with advanced options
Related Links
PDB - Protein Data Bank
PDBsum - a pictorial database that provides an at-a-glance overview
Proteopedia - an interactive encyclopedia of proteins
MarkUs - a function annotation server
PDB Files with Conservation Scores
PDB File with ConSurf Results in its Header (for FirstGlance in Jmol or Protein Explorer)
PDB File with Conservation Scores in the tempFactor field (for Pymol or Chimera)
Phylogenetic Tree
Download Phylogenetic Tree (Newick format)
View Phylogenetic Tree (with online viewer)
Creating High Resolution Figures and Sessions
Follow the instructions to produce a session in RasMol
Follow the instructions to produce a figure in Chimera
Follow the instructions to produce a figure in PyMol